Aliases : RBCS1A
Description : small subunit of ribulose-1,5-bisphosphat carboxylase/oxygenase heterodimer & original description: none
Gene families : OG0000735 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000735_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pir_g12333 | |
Cluster | HCCA: Cluster_37 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00079p00061090 | evm_27.TU.AmTr_v1... | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g33021 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene02941.t1 | RBCS1A, Aspi01Gene02941 | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene45745.t1 | RBCS1A, Aspi01Gene45745 | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
Ceric.09G051000.1 | RBCS1A, Ceric.09G051000 | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.09G051500.1 | RBCS1A, Ceric.09G051500 | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g09882 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g11463 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
Pp3c4_11770V3.1 | RBCS1A, Pp3c4_11770 | Ribulose bisphosphate carboxylase (small chain) family protein | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g32726 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g60704 | RBCS1A | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
Smo147927 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | HCCA |
MF | GO:0004000 | adenosine deaminase activity | IEP | HCCA |
MF | GO:0005216 | monoatomic ion channel activity | IEP | HCCA |
BP | GO:0006382 | adenosine to inosine editing | IEP | HCCA |
BP | GO:0006400 | tRNA modification | IEP | HCCA |
BP | GO:0008033 | tRNA processing | IEP | HCCA |
MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | HCCA |
BP | GO:0009451 | RNA modification | IEP | HCCA |
MF | GO:0015276 | ligand-gated monoatomic ion channel activity | IEP | HCCA |
BP | GO:0016553 | base conversion or substitution editing | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
MF | GO:0019239 | deaminase activity | IEP | HCCA |
MF | GO:0022834 | ligand-gated channel activity | IEP | HCCA |
MF | GO:0022836 | gated channel activity | IEP | HCCA |
MF | GO:0022839 | monoatomic ion gated channel activity | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000894 | RuBisCO_ssu_dom | 65 | 172 |
No external refs found! |