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  5. Pir_g12119

Pir_g12119


Description : not classified & original description: none


Gene families : OG0000049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12119

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00148320 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G28660 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G27360 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G05180 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g02802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42819.t1 Aspi01Gene42819 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G019000.1 FXG1, ATFXG1,... not classified & original description: pacid=50589420... 0.03 OrthoFinder output from all 47 species
Ceric.31G052200.1 Ceric.31G052200 not classified & original description: pacid=50575091... 0.03 OrthoFinder output from all 47 species
Dac_g25035 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16377 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g11730.1 LOC_Os01g11730 GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g12320.1 LOC_Os01g12320 GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g12381.1 LOC_Os01g12381 GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g46169.1 LOC_Os01g46169 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g39740.1 LOC_Os07g39740 GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39750.1 LOC_Os07g39750 GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g01408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10433283g0020 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_8577882g0010 No alias GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g20777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09862 FXG1, ATFXG1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g006487.1.1 Solyc08g006487 Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 OrthoFinder output from all 47 species
Spa_g50031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020311_P002 Zm00001e020311 GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
InterPro domains Description Start Stop
IPR001087 GDSL 43 370
No external refs found!