1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g12108

Pir_g12108 (CRF3)


Aliases : CRF3

Description : subgroup ERF-VI transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g12108

Tools
Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.02 OrthoFinder output from all 47 species
Adi_g001999 HRE1 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g017242 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g041740 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g18891 HRE2 subgroup ERF-VI transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g21431 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G060100.1 HRE1, Ceric.11G060100 subgroup ERF-VI transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.15G043800.1 HRE2, Ceric.15G043800 transcription factor component *(HRE/RAP2.12) of... 0.09 OrthoFinder output from all 47 species
LOC_Os02g06330.1 ATERF4, RAP2.5,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g57340.1 ATERF3, ERF3,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Msp_g02834 No alias subgroup ERF-III transcription factor & original... 0.05OrthoFinder output from all 47 species
Ore_g21499 No alias cutin and suberin biosynthesis transcription factor... 0.03 OrthoFinder output from all 47 species
Ore_g27584 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021258 CRF5 subgroup ERF-VI transcription factor & original... 0.02 OrthoFinder output from all 47 species
Tin_g10351 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.05 OrthoFinder output from all 47 species
Tin_g30387 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Tin_g30824 ORA47 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e023870_P001 RAP2.4, Zm00001e023870 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 146 195
No external refs found!