Pir_g12075 (GATA9)

Aliases : GATA9

Description : transcription factor *(A/B-GATA) & original description: none

Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g12075

Target	Alias	Description	ECC score	Gene Family Method
AT1G08000	GATA10	GATA transcription factor 10	0.02	OrthoFinder output from all 47 species
AT3G06740	GATA15	GATA transcription factor 15	0.03	OrthoFinder output from all 47 species
AT3G60530	GATA4	GATA transcription factor 4	0.02	OrthoFinder output from all 47 species
Aob_g12562	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g21032	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0155.g053586	GNC, GATA21	transcription factor *(A/B-GATA) & original description:...	0.03	OrthoFinder output from all 47 species
Cba_g05826	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g38063	GATA5	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001094.21	GATA7	RNA biosynthesis.transcriptional activation.C2C2...	0.01	OrthoFinder output from all 47 species
Ehy_g06602	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01015204001	GNC, GATA21	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01018951001	HAN, MNP, GATA18	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
GSVIVT01035048001	GATA15	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
LOC_Os01g24070.1	GATA23, LOC_Os01g24070	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
LOC_Os05g50270.1	GATA19, LOC_Os05g50270	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species
Len_g07829	GATA9	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Len_g08386	GATA12	transcription factor *(A/B-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g09627	GATA9	transcription factor *(A/B-GATA) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g033660.4.1	GATA5, Solyc03g033660	transcription factor (GATA)	0.03	OrthoFinder output from all 47 species
Zm00001e026560_P001	GATA20, Zm00001e026560	transcription factor (GATA)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	HCCA
BP	GO:0001510	RNA methylation	IEP	HCCA
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	HCCA
MF	GO:0005096	GTPase activator activity	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
MF	GO:0008047	enzyme activator activity	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008649	rRNA methyltransferase activity	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016436	rRNA (uridine) methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0031167	rRNA methylation	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
MF	GO:0070042	rRNA (uridine-N3-)-methyltransferase activity	IEP	HCCA
BP	GO:0070475	rRNA base methylation	IEP	HCCA
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	HCCA
MF	GO:0140677	molecular function activator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	302	336

External Links

No external refs found!

Pir_g12075 (GATA9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation