1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g11827

Pir_g11827


Description : not classified & original description: none


Gene families : OG0004219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004219_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11827

Target Alias Description ECC score Gene Family Method Actions
AT3G61480 No alias Quinoprotein amine dehydrogenase, beta chain-like;... 0.04 OrthoFinder output from all 47 species
Ala_g08496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000787 No alias not classified & original description: CDS=268-3795 0.03 OrthoFinder output from all 47 species
Ceric.07G054900.1 Ceric.07G054900 not classified & original description: pacid=50626774... 0.05 OrthoFinder output from all 47 species
Dcu_g14638 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g12810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g54500.1 LOC_Os02g54500 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Lfl_g06750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp5g05920.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g05457 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e023736_P002 Zm00001e023736 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR009771 Ribosome_control_1 682 936
No external refs found!