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  5. Pir_g11388

Pir_g11388 (EMB2754)


Aliases : EMB2754

Description : HOPS-specific component *(VPS39) of HOPS/CORVET membrane tethering complexes & original description: none


Gene families : OG0004665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004665_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11388

Target Alias Description ECC score Gene Family Method Actions
Aev_g03386 EMB2754 HOPS-specific component *(VPS39) of HOPS/CORVET membrane... 0.03 OrthoFinder output from all 47 species
Als_g01957 EMB2754 HOPS-specific component *(VPS39) of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Dcu_g39227 EMB2754 HOPS-specific component *(VPS39) of HOPS/CORVET membrane... 0.05 OrthoFinder output from all 47 species
Ehy_g32355 EMB2754 HOPS-specific component *(VPS39) of HOPS/CORVET membrane... 0.03 OrthoFinder output from all 47 species
GSVIVT01018960001 EMB2754 Vesicle trafficking.target membrane... 0.03 OrthoFinder output from all 47 species
Gb_04249 EMB2754 HOPS-specific component VPS39 of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species
Lfl_g21335 EMB2754 HOPS-specific component *(VPS39) of HOPS/CORVET membrane... 0.03 OrthoFinder output from all 47 species
Mp3g21320.1 EMB2754 HOPS-specific component VPS39 of HOPS/CORVET membrane... 0.05 OrthoFinder output from all 47 species
Smo149115 EMB2754 Vesicle trafficking.target membrane... 0.04 OrthoFinder output from all 47 species
Zm00001e005474_P001 EMB2754, Zm00001e005474 HOPS-specific component VPS39 of HOPS/CORVET membrane... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
CC GO:0008290 F-actin capping protein complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010639 negative regulation of organelle organization IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0030834 regulation of actin filament depolymerization IEP HCCA
BP GO:0030835 negative regulation of actin filament depolymerization IEP HCCA
BP GO:0030837 negative regulation of actin filament polymerization IEP HCCA
BP GO:0031333 negative regulation of protein-containing complex assembly IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032272 negative regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043242 negative regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043244 regulation of protein-containing complex disassembly IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051016 barbed-end actin filament capping IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051129 negative regulation of cellular component organization IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051494 negative regulation of cytoskeleton organization IEP HCCA
BP GO:0051693 actin filament capping IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901879 regulation of protein depolymerization IEP HCCA
BP GO:1901880 negative regulation of protein depolymerization IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902904 negative regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR001180 CNH_dom 79 287
IPR019452 VPS39/TGF_beta_rcpt-assoc_1 512 622
IPR019453 VPS39/TGF_beta_rcpt-assoc_2 913 1020
No external refs found!