Pir_g11296 (CRF4)

Aliases : CRF4

Description : subgroup ERF-VI transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g11296

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00111p00051610	TINY2,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Adi_g009324	ATERF12, ERF12	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g060064	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g10901	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Als_g13579	PUCHI	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene18350.t1	RAP2.12, Aspi01Gene18350	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Aspi01Gene48933.t1	RAP2.2, Aspi01Gene48933	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Aspi01Gene49723.t1	HRE2, Aspi01Gene49723	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Aspi01Gene53917.t1	Aspi01Gene53917	subgroup ERF-II transcription factor *(ERF16/17/18) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene57065.t1	ATERF12, ERF12,...	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0045.g029841	No alias	not classified & original description: CDS=1-2064	0.02	OrthoFinder output from all 47 species
Azfi_s0070.g036745	ATERF-9, ERF9, ATERF9	not classified & original description: CDS=1-3831	0.05	OrthoFinder output from all 47 species
Cba_g06839	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g23893	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Cba_g26267	ATERF-9, ERF9, ATERF9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.23G011400.1	Ceric.23G011400	subgroup ERF-VI transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ehy_g29593	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
LOC_Os01g58420.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g41780.1	ATERF-9, ERF9,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Lfl_g03871	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
MA_5658g0010	ATERF12, ERF12	transcription factor (ERF)	0.05	OrthoFinder output from all 47 species
Msp_g03932	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Msp_g08809	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g08810	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g10836	ERF7, ATERF7, ATERF-7	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Msp_g14138	ERF-1, ATERF-1	subgroup ERF-IX transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g04123	TINY2	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g17161	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g32986	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g10313	No alias	subgroup ERF-I transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g28144	DDF1	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013122	ORA47	not classified & original description: CDS=1-783	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023700	AtERF48, DREB2C	subgroup ERF-IV/DREB2 transcription factor & original...	0.02	OrthoFinder output from all 47 species
Smo428344	No alias	No description available	0.02	OrthoFinder output from all 47 species
Spa_g06007	CRF3	subgroup ERF-VI transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g08163	ATERF-9, ERF9, ATERF9	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Spa_g18741	CRF3	subgroup ERF-VI transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g13149	ATERF-9, ERF9, ATERF9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g29003	tny	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Zm00001e007332_P001	Zm00001e007332	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Zm00001e013927_P001	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Zm00001e015968_P001	Zm00001e015968	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Zm00001e025064_P001	ATERF3, ERF3,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	147	195

External Links

No external refs found!

Pir_g11296 (CRF4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation