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  5. Pir_g11286

Pir_g11286


Description : not classified & original description: none


Gene families : OG0001358 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11286
Cluster HCCA: Cluster_252

Target Alias Description ECC score Gene Family Method Actions
AT5G43870 No alias Plant protein of unknown function (DUF828) with plant... 0.03 OrthoFinder output from all 47 species
Ala_g12666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo268691 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo269293 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0001578 microtubule bundle formation IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
MF GO:0005548 phospholipid transporter activity IEP HCCA
CC GO:0005874 microtubule IEP HCCA
CC GO:0005879 axonemal microtubule IEP HCCA
CC GO:0005881 cytoplasmic microtubule IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007009 plasma membrane organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015914 phospholipid transport IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0017121 plasma membrane phospholipid scrambling IEP HCCA
MF GO:0017128 phospholipid scramblase activity IEP HCCA
BP GO:0034204 lipid translocation IEP HCCA
BP GO:0035082 axoneme assembly IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045332 phospholipid translocation IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097035 regulation of membrane lipid distribution IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
MF GO:0140303 intramembrane lipid transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR008546 VAN3-bd-like_auxin_canal 58 346
IPR013666 PH_pln 378 482
No external refs found!