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  5. Pir_g11037

Pir_g11037 (FD1, ATFD1)


Aliases : FD1, ATFD1

Description : ferredoxin targeted to NADP reduction & original description: none


Gene families : OG0000635 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000635_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g11037

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00129320 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.linear electron... 0.04 OrthoFinder output from all 47 species
AT1G60950 FED A, ATFD2 2Fe-2S ferredoxin-like superfamily protein 0.07 OrthoFinder output from all 47 species
Aop_g05087 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Ceric.13G078000.1 FD1, ATFD1,... ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Cre14.g626700 FD1, ATFD1 Photosynthesis.photophosphorylation.linear electron... 0.03 OrthoFinder output from all 47 species
Dac_g14348 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.09 OrthoFinder output from all 47 species
Dac_g14349 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Dcu_g50350 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Dde_g02518 ATFD3, FD3 ferredoxin targeted to NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Dde_g15503 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ehy_g26325 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Gb_22108 No alias ferredoxin electron carrier 0.02 OrthoFinder output from all 47 species
Gb_25335 FED A, ATFD2 ferredoxin electron carrier 0.03 OrthoFinder output from all 47 species
LOC_Os08g01380.1 FED A, ATFD2,... ferredoxin electron carrier 0.03 OrthoFinder output from all 47 species
Len_g05004 ATFD3, FD3 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Len_g55855 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Lfl_g20268 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.01 OrthoFinder output from all 47 species
Mp2g15250.1 FD1, ATFD1 ferredoxin electron carrier 0.08 OrthoFinder output from all 47 species
Msp_g05782 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.09 OrthoFinder output from all 47 species
Nbi_g18588 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Nbi_g18589 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Ore_g14958 FED A, ATFD2 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Pnu_g07739 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Pp3c4_8330V3.1 FED A, ATFD2, Pp3c4_8330 2Fe-2S ferredoxin-like superfamily protein 0.02 OrthoFinder output from all 47 species
Ppi_g41247 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Ppi_g62420 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Solyc10g044520.3.1 FED A, ATFD2,... ferredoxin electron carrier 0.06 OrthoFinder output from all 47 species
Tin_g21014 FD1, ATFD1 ferredoxin targeted to NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Zm00001e029127_P002 FED A, ATFD2,... ferredoxin electron carrier 0.04 OrthoFinder output from all 47 species
Zm00001e029128_P001 FED A, ATFD2,... ferredoxin electron carrier 0.06 OrthoFinder output from all 47 species
Zm00001e029129_P001 FED A, ATFD2,... ferredoxin electron carrier 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 60 131
No external refs found!