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  5. Pir_g10951

Pir_g10951


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g10951

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00256680 evm_27.TU.AmTr_v1... PH, RCC1 and FYVE domains-containing protein 1... 0.02 OrthoFinder output from all 47 species
Adi_g014208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre16.g691050 PRAF1 PH, RCC1 and FYVE domains-containing protein 1... 0.01 OrthoFinder output from all 47 species
Dac_g09907 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g24610.1 No alias PH, RCC1 and FYVE domains-containing protein 1... 0.03 OrthoFinder output from all 47 species
Pnu_g27149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024837 No alias not classified & original description: CDS=1-2619 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 273 322
IPR000408 Reg_chr_condens 209 258
IPR000408 Reg_chr_condens 154 206
IPR000408 Reg_chr_condens 325 374
IPR000408 Reg_chr_condens 103 151
IPR000408 Reg_chr_condens 379 426
IPR027988 BRX_N 684 718
IPR000306 Znf_FYVE 430 496
IPR013591 Brevis_radix_dom 824 878
No external refs found!