Pir_g10941 (PSBC)

Aliases : PSBC

Description : component *(PsbC/CP43) of PS-II reaction center complex & original description: none

Gene families : OG0003214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003214_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g10941
Cluster	HCCA: Cluster_227

Target	Alias	Description	ECC score	Gene Family Method
Dde_g30384	PSBC	component *(PsbC/CP43) of PS-II reaction center complex...	0.06	OrthoFinder output from all 47 species
Ehy_g02865	PSBC	component *(PsbC/CP43) of PS-II reaction center complex...	0.03	OrthoFinder output from all 47 species
Nbi_g01251	PSBC	component *(PsbC/CP43) of PS-II reaction center complex...	0.04	OrthoFinder output from all 47 species
Ppi_g02376	PSBC	component *(PsbC/CP43) of PS-II reaction center complex...	0.05	OrthoFinder output from all 47 species
Solyc07g009000.1.1	PSBC, Solyc07g009000	Photosystem II CP43 reaction center protein OS=Coffea...	0.04	OrthoFinder output from all 47 species
Solyc12g027550.2.1	PSBC, Solyc12g027550	Photosystem II CP43 reaction center protein OS=Nicotiana...	0.04	OrthoFinder output from all 47 species
Tin_g01229	PSBC	component *(PsbC/CP43) of PS-II reaction center complex...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	IEA	Interproscan
BP	GO:0009767	photosynthetic electron transport chain	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016168	chlorophyll binding	IEA	Interproscan
BP	GO:0019684	photosynthesis, light reaction	IEA	Interproscan
BP	GO:0022900	electron transport chain	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0046906	tetrapyrrole binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000932	PS_antenna-like	1	403

External Links

No external refs found!