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Description : nucleoporin of nuclear pore complex *(NUP1/NUP136) & original description: none
Gene families : OG0002028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002028_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00164270 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.04 | OrthoFinder output from all 47 species | |
| AT3G10650 | No alias | BEST Arabidopsis thaliana protein match is:... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06113 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g31899 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g60762 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g08994 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14237 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.07G044000.1 | Ceric.07G044000 | not classified & original description: pacid=50627215... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.08G016500.1 | Ceric.08G016500 | not classified & original description: pacid=50638572... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z123400.1 | Ceric.1Z123400 | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g49204 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g31798 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04036 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26942 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01034601001 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_18080 | No alias | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species | |
| Gb_35130 | No alias | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19191 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30747 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g14234 | No alias | nuclear lamina CRWN-interacting protein *(KAKU4) &... | 0.07 | OrthoFinder output from all 47 species | |
| MA_87384g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_87384g0020 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g35297 | No alias | nuclear lamina CRWN-interacting protein *(KAKU4) &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48013 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g09860 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g43950 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g28862 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g11296 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0043.g012850 | No alias | not classified & original description: CDS=3-2681 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13887 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g006390.2.1 | Solyc11g006390 | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g06717 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g07621 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g06136 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g13775 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e005928_P001 | Zm00001e005928 | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| MF | GO:0071949 | FAD binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |