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  5. Pir_g10409

Pir_g10409


Description : not classified & original description: none


Gene families : OG0001680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g10409

Target Alias Description ECC score Gene Family Method Actions
Adi_g060922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G071000.1 Ceric.21G071000 not classified & original description: pacid=50604391... 0.02 OrthoFinder output from all 47 species
Dcu_g02017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g65330.1 LOC_Os01g65330 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc11g017000.2.1 Solyc11g017000 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027001_P003 Zm00001e027001 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0045927 positive regulation of growth IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR021864 DUF3475 225 281
IPR007700 DUF668 448 532
No external refs found!