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  5. Pir_g10359

Pir_g10359


Description : not classified & original description: none


Gene families : OG0006138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g10359
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
Adi_g011683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g089331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01845 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09009 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0154.g053502 No alias not classified & original description: CDS=182-1756 0.02 OrthoFinder output from all 47 species
Ceric.37G045200.1 Ceric.37G045200 not classified & original description: pacid=50615747... 0.03 OrthoFinder output from all 47 species
Ppi_g02270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0004852 uroporphyrinogen-III synthase activity IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001202 WW_dom 358 384
IPR000504 RRM_dom 459 528
No external refs found!