Pir_g10313

Description : subgroup ERF-I transcription factor & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g10313
Cluster	HCCA: Cluster_281

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00099p00029210	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
AMTR_s00129p00119770	RAP2.2,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Adi_g060064	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g10901	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g25437	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene49723.t1	HRE2, Aspi01Gene49723	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
Azfi_s0070.g036745	ATERF-9, ERF9, ATERF9	not classified & original description: CDS=1-3831	0.04	OrthoFinder output from all 47 species
Azfi_s2254.g109997	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g26267	ATERF-9, ERF9, ATERF9	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01036389001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
LOC_Os05g41780.1	ATERF-9, ERF9,...	transcription factor (ERF)	0.02	OrthoFinder output from all 47 species
Len_g15213	WIN1, SHN1	subgroup ERF-V transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Len_g15998	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10432800g0020	CRF3	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Msp_g08809	CRF4	subgroup ERF-VI transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g02477	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g10297	No alias	subgroup ERF-I transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g32986	No alias	subgroup ERF-I transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g34717	ERF72, EBP, ATEBP, RAP2.3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g11296	CRF4	subgroup ERF-VI transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g28144	DDF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c5_11150V3.1	Pp3c5_11150	Integrase-type DNA-binding superfamily protein	0.02	OrthoFinder output from all 47 species
Ppi_g00355	DEAR3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g22071	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015347	RAP2.6	subgroup ERF-X transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0184.g024985	CRF3	subgroup ERF-VI transcription factor & original...	0.04	OrthoFinder output from all 47 species
Solyc03g006320.1.1	ATERF4, RAP2.5,...	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Spa_g06007	CRF3	subgroup ERF-VI transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g18741	CRF3	subgroup ERF-VI transcription factor & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	243	291

External Links

No external refs found!

Pir_g10313

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation