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  5. Pir_g10153

Pir_g10153


Description : RNA splicing regulator *(NSR) & original description: none


Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pir_g10153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00116460 evm_27.TU.AmTr_v1... RNA processing.RNA splicing.spliceosome-associated... 0.03 OrthoFinder output from all 47 species
Adi_g007010 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078114 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078877 No alias RNA splicing regulator *(NSR) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g128678 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62857 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16459 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17260 No alias RNA splicing regulator *(NSR) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g41927 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001280 No alias RNA splicing regulator *(NSR) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g07186 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11428 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G015200.1 Ceric.09G015200 RNA splicing regulator *(NSR) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g31792 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11976 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436362g0020 No alias NSR RNA splicing regulator 0.02 OrthoFinder output from all 47 species
Nbi_g29192 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07293 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18279 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17439 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08348 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g082710.4.1 Solyc03g082710 NSR RNA splicing regulator 0.04 OrthoFinder output from all 47 species
Solyc06g052080.4.1 Solyc06g052080 NSR RNA splicing regulator 0.03 OrthoFinder output from all 47 species
Spa_g06435 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09764 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22372 No alias RNA splicing regulator *(NSR) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g24886 No alias RNA splicing regulator *(NSR) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39064 No alias RNA splicing regulator *(NSR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00769 No alias RNA splicing regulator *(NSR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14155 No alias RNA splicing regulator *(NSR) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e024672_P001 Zm00001e024672 NSR RNA splicing regulator 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005742 mitochondrial outer membrane translocase complex IEP HCCA
BP GO:0006839 mitochondrial transport IEP HCCA
BP GO:0030150 protein import into mitochondrial matrix IEP HCCA
CC GO:0031248 protein acetyltransferase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
CC GO:0070461 SAGA-type complex IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098799 outer mitochondrial membrane protein complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902493 acetyltransferase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
BP GO:1990542 mitochondrial transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 164 232
No external refs found!