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  5. Pir_g09798

Pir_g09798 (BRD4)


Aliases : BRD4

Description : not classified & original description: none


Gene families : OG0003364 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003364_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g09798

Target Alias Description ECC score Gene Family Method Actions
Adi_g035764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g36956 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g37800.1 BRD4, LOC_Os07g37800 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Ore_g44263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02387 BRD4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g073950.4.1 Solyc01g073950 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
CC GO:0005685 U1 snRNP IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006376 mRNA splice site selection IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0022618 ribonucleoprotein complex assembly IEP HCCA
CC GO:0030532 small nuclear ribonucleoprotein complex IEP HCCA
BP GO:0071826 ribonucleoprotein complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0097525 spliceosomal snRNP complex IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0120114 Sm-like protein family complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001487 Bromodomain 722 799
No external refs found!