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Pir_g08534 (AtSWEET12, SWEET12, MTN3)


Aliases : AtSWEET12, SWEET12, MTN3

Description : sugar efflux transporter *(SWEET) & original description: none


Gene families : OG0000098 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g08534

Target Alias Description ECC score Gene Family Method Actions
Adi_g004386 AtSWEET5, SWEET5, AtVEX1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g31730 SWEET7, AtSWEET7 sugar efflux transporter *(SWEET) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08424 AtSWEET12, SWEET12, MTN3 sugar efflux transporter *(SWEET) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g68791 SWEET14, AtSWEET14 sugar efflux transporter *(SWEET) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g70508 AtSWEET5, SWEET5, AtVEX1 sugar efflux transporter *(SWEET) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00638.t1 AtSWEET5,... sugar efflux transporter *(SWEET) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06717.t1 CRK8, Aspi01Gene06717 sugar efflux transporter *(SWEET) & original description: none 0.03 OrthoFinder output from all 47 species ECC Pair graph </i></a></td> </tr> <tr> <td><a href="/sequence/view/2184794" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/2184794">Aspi01Gene31150.t1</a></td> <td>AtSWEET15,...</td> <td>sugar efflux transporter *(SWEET) & original description: none</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/34548401" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/490949/87/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/438231" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/438231">Len_g15847</a></td> <td>AtSWEET5, SWEET5, AtVEX1</td> <td>sugar efflux transporter *(SWEET) & original description: none</td> <td>0.02</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/34558755" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/490949/87/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1673113" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1673113">Smo146597</a></td> <td>AtSWEET1, SWEET1</td> <td>Solute transport.carrier-mediated transport.TOC...</td> <td>0.02</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/34563426" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/490949/87/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> <tr> <td><a href="/sequence/view/1493158" class="qtip_tooltip qtip_dynamic_tooltip" qtip_href="/sequence/tooltip/1493158">Zm00001e026168_P001</a></td> <td>AtSWEET17,...</td> <td>sugar efflux transporter (SWEET)</td> <td>0.03</td> <td>OrthoFinder output from all 47 species</td> <td><a href="/ecc/graph_pair/34563428" data-toggle="tooltip" data-placement="top" title="View ECC pair as graph"><i class="fa fa-eye"></i></a> <a href="/ecc/graph/490949/87/21" data-toggle="tooltip" data-placement="top" title="View ECC as graph"><i class="fa fa-sitemap"></i></a></td> </tr> </tbody> </table> </div> <br> <h3 class="banner-blue" id="annotation">Functional Annotation</h3> <div class="panel with-nav-tabs panel-default"> <div class="panel-heading"> <ul class="nav nav-tabs"> <li class="active"><a href="#tab1default" data-toggle="tab">GO</a></li> <li><a href="#tab2default" data-toggle="tab">Predicted GO</a></li> <li><a href="#tab3default" data-toggle="tab">InterPro</a></li> </ul> </div> <div> <div class="tab-content"> <div class="tab-pane fade in active" id="tab1default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr class="parent_term" style="display: none" style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/4161" data-toggle="tooltip" data-placement="top" title=""A location, relative to cellular compartments and structures, occupied by a macromolecular machine when it carries out a molecular function. There are two ways in which the gene ontology describes locations of gene products: (1) relative to cellular structures (e.g., cytoplasmic side of plasma membrane) or compartments (e.g., mitochondrion), and (2) the stable macromolecular complexes of which they are parts (e.g., the ribosome)." [GOC:pdt, NIF_Subcellular:sao1337158144]">GO:0005575</a></td> <td class="col-xs-6">cellular_component</td> <td class="col-xs-1">None</td> <td class="col-xs-2">Extended</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/9874" data-toggle="tooltip" data-placement="top" title=""A lipid bilayer along with all the proteins and protein complexes embedded in it and attached to it." [GOC:dos, GOC:mah, ISBN:0815316194]">GO:0016020</a></td> <td class="col-xs-6">membrane</td> <td class="col-xs-1">IEA</td> <td class="col-xs-2">Interproscan</td> </tr> <tr class="parent_term" style="display: none" style="clear:both;"> <td class="col-xs-1">CC</td> <td class="col-xs-2"><a href="/go/view/38224" data-toggle="tooltip" data-placement="top" title=""A part of a cellular organism that is either an immaterial entity or a material entity with granularity above the level of a protein complex but below that of an anatomical system. Or, a substance produced by a cellular organism with granularity above the level of a protein complex." [GOC:kmv]">GO:0110165</a></td> <td class="col-xs-6">cellular anatomical entity</td> <td class="col-xs-1">None</td> <td class="col-xs-2">Extended</td> </tr> </tbody> </table> </div> <div class="panel-body"> <a href="#" id="go_toggle">Toggle parental</a> </div> </div> <div class="tab-pane fade" id="tab2default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="predicted_go_table"> <thead> <tr> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Type</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/go" data-target="#helpModal">GO</abbr> Term</th> <th class="col-xs-6" data-sort="string-ins"><span class="sort-icon"></span>Name</th> <th class="col-xs-1" data-sort="string-ins"><span class="sort-icon"></span>Evidence</th> <th class="col-xs-2" data-sort="string-ins"><span class="sort-icon"></span>Source</th> </tr> </thead> <tbody> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/21931" data-toggle="tooltip" data-placement="top" title=""Binding to a protein or a protein-containing complex to assist the protein folding process." [GOC:mtg_cambridge_2009]">GO:0044183</a></td> <td class="col-xs-6">protein folding chaperone</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/24303" data-toggle="tooltip" data-placement="top" title=""The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits." [ISBN:0198506732]">GO:0046983</a></td> <td class="col-xs-6">protein dimerization activity</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> <tr style="clear:both;"> <td class="col-xs-1">MF</td> <td class="col-xs-2"><a href="/go/view/39010" data-toggle="tooltip" data-placement="top" title=""Binding to a protein or a protein-containing complex to assist the protein folding process, driven by ATP hydrolysis." [PMID:27365453]">GO:0140662</a></td> <td class="col-xs-6">ATP-dependent protein folding chaperone</td> <td class="col-xs-1">IEP</td> <td class="col-xs-2">HCCA</td> </tr> </tbody> </table> </div> </div> <div class="tab-pane fade" id="tab3default"> <div class="table-responsive"> <table class="table table-striped table-fixed" id="interpro_table"> <thead> <tr> <th class="col-xs-3" data-sort="string-ins"><span class="sort-icon"></span><abbr title="Click to show help" href="/help/interpro_domain" data-target="#helpModal">InterPro domains</abbr></th> <th class="col-xs-5" data-sort="string-ins"><span class="sort-icon"></span>Description</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Start</th> <th class="col-xs-2" data-sort="int"><span class="sort-icon"></span>Stop</th> </tr> </thead> <tbody> <tr> <td class="col-xs-3"><a href="/interpro/view/3555">IPR004316</a></td> <td class="col-xs-5">SWEET_sugar_transpr</td> <td class="col-xs-2">8</td> <td class="col-xs-2">92</td> </tr> <tr> <td class="col-xs-3"><a href="/interpro/view/3555">IPR004316</a></td> <td class="col-xs-5">SWEET_sugar_transpr</td> <td class="col-xs-2">128</td> <td class="col-xs-2">210</td> </tr> </tbody> </table> </div> </div> </div> </div> </div> <div class="row"> <div class="col-lg-12 col-md-12 col-sm-12"> <div class="panel panel-default"> <div class="panel-heading" id="links">External Links</div> <div class="table-responsive"> <table class="table table-striped table-separated"> <tbody> <tr> <td><em>No external refs found!</em></td> </td> </tr> </tbody> </table> </div> </div> </div> </div> <div class="modal" id="profileModal" tabindex="-1" role="dialog" aria-labelledby="profileModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> </div> </div> </div> <footer class="footer" id="footer"> <div class="container"> <div class="row"> <div class="col-xs-2"><strong class="text-muted"><a href="/features" class="text-muted">CoNekT</a></strong></div> <div class="col-xs-2"><a href="/about" class="text-muted">About</a></div> <div class="col-xs-2"><a href="/contact" class="text-muted">Contact</a></div> <div class="col-xs-2"><a href="/disclaimer" class="text-muted">Disclaimer</a></div> <div class="col-xs-2"><a href="/privacy" class="text-muted">Privacy policy</a></div> </div> </div> </footer> <div class="modal" id="helpModal" tabindex="-1" role="dialog" aria-labelledby="helpModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> </div> </div> </div> <div class="modal" id="loaderModal" tabindex="-1" role="dialog" aria-labelledby="loaderModalLabel"> <div class="modal-dialog" role="document" style="width:1000px;height:800px;"> <div class="modal-content"> <div class="modal-body"> <div id="leafy_loader"></div> <p class="text-center text-muted" id="leafy_loader_text">Loading ... please wait ... </p> <p class="text-center" id="leafy_loader_close_btn" style="display:none"><button type="button" class="btn btn-primary" data-dismiss="modal" style>Close</button></p> </div> </div> </div> </div> <script src="/static/js/jquery.min.js"></script> <script src="/static/js/bootstrap.min.js"></script> <script src="/static/js/stupidtable.min.js"></script> <script src="/static/js/TweenMax.min.js"></script> <script src="/static/js/jquery.qtip.min.js"></script> <script src="/static/js/planet_loader.js"></script> <script> function init_qtip() { $('.qtip_tooltip').each(function() { $(this).qtip({ content: { text: function(event, api) { $.ajax({ url: api.elements.target.attr('qtip_href') }) .then(function(content) { // Set the tooltip content upon successful retrieval api.set('content.text', content); 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