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  5. Pir_g07610

Pir_g07610


Description : scaffold component *(LCAA) of Mg-protoporphyrin IX monomethylester cyclase complex & original description: none


Gene families : OG0006125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g07610

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00179590 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
AT5G58250 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aev_g02557 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.05 OrthoFinder output from all 47 species
Ehy_g15832 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
LOC_Os03g21370.1 LOC_Os03g21370 scaffolding component LCAA of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Len_g20674 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Mp5g08000.1 No alias scaffolding component LCAA of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Msp_g10285 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Spa_g16999 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species
Spa_g28966 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.02 OrthoFinder output from all 47 species
Zm00001e001556_P001 Zm00001e001556 scaffolding component LCAA of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019616 Ycf54 81 170
No external refs found!