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  5. Pir_g07485

Pir_g07485


Description : scaffold nucleoporin of nuclear pore complex *(NUP75/85) & original description: none


Gene families : OG0004258 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g07485
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
Adi_g115140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02903 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species
Ppi_g58317 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.05 OrthoFinder output from all 47 species
Spa_g00457 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.02 OrthoFinder output from all 47 species
Tin_g06661 No alias scaffold nucleoporin of nuclear pore complex *(NUP75/85)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
InterPro domains Description Start Stop
IPR011502 Nucleoporin_Nup85 73 674
No external refs found!