1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g04947

Pir_g04947 (RCD3, CDI3, SLAC1, OZS1)


Aliases : RCD3, CDI3, SLAC1, OZS1

Description : anion channel *(SLAC) & original description: none


Gene families : OG0000650 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000650_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g04947

Target Alias Description ECC score Gene Family Method Actions
Adi_g007223 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25291 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019915001 RCD3, CDI3, SLAC1, OZS1 Solute transport.channels.SLAC anion channel 0.03 OrthoFinder output from all 47 species
MA_10428033g0010 RCD3, CDI3, SLAC1, OZS1 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
MA_175194g0010 RCD3, CDI3, SLAC1, OZS1 anion channel (SLAC) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001833 RCD3, CDI3, SLAC1, OZS1 anion channel *(SLAC) & original description: CDS=1-1644 0.03 OrthoFinder output from all 47 species
Zm00001e020426_P001 SLAH3, Zm00001e020426 anion channel (SLAC) 0.04 OrthoFinder output from all 47 species
Zm00001e027903_P001 SLAH2, Zm00001e027903 anion channel (SLAC) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004695 SLAC1/Mae1/Ssu1/TehA 198 500
No external refs found!