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  5. Pir_g04876

Pir_g04876 (FSD2)


Aliases : FSD2

Description : cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2) & original description: none


Gene families : OG0002805 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002805_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g04876

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00128010 FSD2,... RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
AT5G23310 FSD3 Fe superoxide dismutase 3 0.06 OrthoFinder output from all 47 species
AT5G51100 FSD2 Fe superoxide dismutase 2 0.04 OrthoFinder output from all 47 species
Aop_g16309 FSD2 iron superoxide dismutase *(FSD) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77404 FSD2 iron superoxide dismutase *(FSD) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42728 FSD2 iron superoxide dismutase *(FSD) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05303 ATFSD1, FSD1 iron superoxide dismutase *(FSD) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01013850001 FSD2 RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
GSVIVT01026137001 FSD3 RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
LOC_Os06g05110.1 FSD3, LOC_Os06g05110 iron superoxide dismutase. PAP4/FSD3 cofactor of... 0.02 OrthoFinder output from all 47 species
Lfl_g07682 FSD2 cofactor of plastid-encoded RNA polymerase *(PAP9/FSD2)... 0.03 OrthoFinder output from all 47 species
Mp7g14090.1 ATFSD1, FSD1 iron superoxide dismutase 0.03 OrthoFinder output from all 47 species
Ppi_g11986 FSD2 iron superoxide dismutase *(FSD) & original description: none 0.05 OrthoFinder output from all 47 species
Smo91586 ATFSD1, FSD1 Redox homeostasis.enzymatic reactive oxygen species... 0.04 OrthoFinder output from all 47 species
Zm00001e036663_P001 FSD2, Zm00001e036663 iron superoxide dismutase 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEA Interproscan
BP GO:0006801 superoxide metabolic process IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
MF GO:0005262 calcium channel activity IEP HCCA
BP GO:0006816 calcium ion transport IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0008962 phosphatidylglycerophosphatase activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015085 calcium ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0070588 calcium ion transmembrane transport IEP HCCA
BP GO:0097553 calcium ion transmembrane import into cytosol IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098657 import into cell IEP HCCA
BP GO:0098659 inorganic cation import across plasma membrane IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:0098703 calcium ion import across plasma membrane IEP HCCA
BP GO:0098739 import across plasma membrane IEP HCCA
BP GO:0099587 inorganic ion import across plasma membrane IEP HCCA
InterPro domains Description Start Stop
IPR019832 Mn/Fe_SOD_C 132 242
IPR019831 Mn/Fe_SOD_N 42 124
No external refs found!