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  5. Pir_g04772

Pir_g04772


Description : not classified & original description: none


Gene families : OG0000717 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g04772

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00212100 evm_27.TU.AmTr_v1... Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Aob_g24114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g08935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g51890.1 LOC_Os02g51890 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp8g04430.1 No alias Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pnu_g12381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00719 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015636_P001 Zm00001e015636 Probable RNA-binding protein ARP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 73 130
No external refs found!