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  5. Pir_g03404

Pir_g03404


Description : CWF19-type post-transcriptionally regulatory factor & original description: none


Gene families : OG0005285 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005285_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g03404

Target Alias Description ECC score Gene Family Method Actions
Dde_g31257 No alias CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Pnu_g18160 No alias CWF19-type post-transcriptionally regulatory factor &... 0.03 OrthoFinder output from all 47 species
Ppi_g64121 No alias CWF19-type post-transcriptionally regulatory factor &... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR006768 Cwf19-like_C_dom-1 392 505
IPR006767 Cwf19-like_C_dom-2 526 608
IPR000571 Znf_CCCH 323 344
No external refs found!