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Pir_g03350


Description : component *(YIP5) of trans-Golgi-network (TGN) trafficking complex & original description: none


Gene families : OG0002556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g03350

Target Alias Description ECC score Gene Family Method Actions
Ceric.05G102000.1 Ceric.05G102000 component *(YIP5) of trans-Golgi-network (TGN)... 0.05 OrthoFinder output from all 47 species
Cre17.g722700 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01000042001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g42480.1 LOC_Os01g42480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_91225g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g05520.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g00434 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Nbi_g02728 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species
Ppi_g01950 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.02 OrthoFinder output from all 47 species
Solyc01g098900.3.1 Solyc01g098900 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g00950 No alias component *(YIP5) of trans-Golgi-network (TGN)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006977 Yip1_dom 107 267
No external refs found!