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  5. Pir_g03333

Pir_g03333


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0002372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g03333

Target Alias Description ECC score Gene Family Method Actions
Adi_g007414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g051123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053488 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43228 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32864 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020103 No alias ssDNA-binding protein *(OSB) & original description: CDS=1-492 0.03 OrthoFinder output from all 47 species
Sam_g25185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g20435 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g25557 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55945 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 320 341
IPR002885 Pentatricopeptide_repeat 218 240
IPR002885 Pentatricopeptide_repeat 243 290
IPR002885 Pentatricopeptide_repeat 141 188
No external refs found!