Aliases : AtRABA1f, RABA1f
Description : A-class RAB GTPase & original description: none
Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00010p00103890 | AtRABA6b,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00068p00145200 | ATRABA2A,... | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | OrthoFinder output from all 47 species | |
AT1G16920 | ATRABA1B, RAB11, RABA1b | RAB GTPase homolog A1B | 0.02 | OrthoFinder output from all 47 species | |
Adi_g081036 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g09261 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aev_g31350 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g00731 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ala_g29604 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g04921 | AtRABA5a, RABA5a | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0056.g034200 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: CDS=99-740 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g50460 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os01g54590.1 | ATRABA1B, RAB11,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g20050.1 | RAB-A2C,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Len_g02212 | AtRABA5d, RABA5d | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g02647 | RAB-A2C,... | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g16053 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Len_g28666 | AtRABA5d, RABA5d | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Msp_g05544 | AtRABA5d, RABA5d | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g09974 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g39136 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g00627 | AtRABA1f, RABA1f | A-class RAB GTPase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g05911 | ATRABA2A,... | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g00826 | RABA2b,... | A-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g27440 | ATRABA5C, ARA4,... | A-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e003625_P001 | ATRABA5C, ARA4,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027669_P001 | ATRABA2A,... | A-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e033825_P001 | AtRABA1f,... | A-class RAB GTPase | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003997 | acyl-CoA oxidase activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005777 | peroxisome | IEP | HCCA |
BP | GO:0006486 | protein glycosylation | IEP | HCCA |
BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
BP | GO:0006635 | fatty acid beta-oxidation | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009062 | fatty acid catabolic process | IEP | HCCA |
MF | GO:0015631 | tubulin binding | IEP | HCCA |
BP | GO:0016042 | lipid catabolic process | IEP | HCCA |
BP | GO:0016054 | organic acid catabolic process | IEP | HCCA |
BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | HCCA |
MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | HCCA |
MF | GO:0016740 | transferase activity | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
BP | GO:0019395 | fatty acid oxidation | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0030258 | lipid modification | IEP | HCCA |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
BP | GO:0034440 | lipid oxidation | IEP | HCCA |
BP | GO:0036211 | protein modification process | IEP | HCCA |
CC | GO:0042579 | microbody | IEP | HCCA |
MF | GO:0043015 | gamma-tubulin binding | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
BP | GO:0043412 | macromolecule modification | IEP | HCCA |
BP | GO:0043413 | macromolecule glycosylation | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044242 | cellular lipid catabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0046395 | carboxylic acid catabolic process | IEP | HCCA |
MF | GO:0051287 | NAD binding | IEP | HCCA |
BP | GO:0070085 | glycosylation | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0072329 | monocarboxylic acid catabolic process | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 14 | 174 |
No external refs found! |