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  5. Pir_g03028

Pir_g03028 (SC35, ATSC35, At-SC35)


Aliases : SC35, ATSC35, At-SC35

Description : not classified & original description: none


Gene families : OG0001818 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g03028

Target Alias Description ECC score Gene Family Method Actions
Adi_g060586 SC35, ATSC35, At-SC35 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08579 SC35, ATSC35, At-SC35 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37208 SC35, ATSC35, At-SC35 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426661g0020 SC35, ATSC35, At-SC35 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g42681 SC35, ATSC35, At-SC35 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11583 SC35, ATSC35, At-SC35 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39115 SC35, ATSC35, At-SC35 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g105140.3.1 SC35, ATSC35,... Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc04g074040.3.1 SC35, ATSC35,... Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005741 mitochondrial outer membrane IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 19 87
No external refs found!