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  5. Pir_g02785

Pir_g02785 (ACT7)


Aliases : ACT7

Description : actin filament protein & original description: none


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02785
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AT3G53750 ACT3 actin 3 0.02 OrthoFinder output from all 47 species
Aev_g21314 ACT7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10476 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g02831 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13846 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10571 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g12151 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29820 ACT7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G073000.1 ACT7, Ceric.11G073000 actin filament protein & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g04609 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g05705 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08477 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026580001 ACT7 Cytoskeleton.microfilament network.actin filament protein 0.02 OrthoFinder output from all 47 species
Len_g50894 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18991 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22569 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
MA_854773g0010 ACT7 Actin OS=Gossypium hirsutum (sp|o81221|act_goshi : 242.0) 0.02 OrthoFinder output from all 47 species
Msp_g10222 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g39943 ACT7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Nbi_g04666 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07984 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08920 ACT11 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08921 ACT11 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g08922 ACT11 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24334 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g31790 ACT7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12549 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g078400.3.1 ACT7, Solyc03g078400 actin filament protein 0.02 OrthoFinder output from all 47 species
Spa_g02411 AAc1, ACT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17579 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23478 ACT7 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!