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  5. Pir_g02268

Pir_g02268


Description : ubiquitin-dependent protease *(DA1) & original description: none


Gene families : OG0000918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000918_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02268

Target Alias Description ECC score Gene Family Method Actions
AT2G39830 DAR2 DA1-related protein 2 0.02 OrthoFinder output from all 47 species
Adi_g105104 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09693 No alias Protein DA1-related 2 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024786 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 OrthoFinder output from all 47 species
Spa_g07145 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51194 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e003135_P001 Zm00001e003135 ubiquitin receptor regulatory protein (DA1) 0.03 OrthoFinder output from all 47 species
Zm00001e005086_P004 Zm00001e005086 ubiquitin receptor regulatory protein (DA1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR022087 DA1-like_dom 257 465
IPR001781 Znf_LIM 108 162
No external refs found!