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  5. Pir_g02230

Pir_g02230


Description : not classified & original description: none


Gene families : OG0000236 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g02230

Target Alias Description ECC score Gene Family Method Actions
AT3G12540 No alias Protein of unknown function, DUF547 0.03 OrthoFinder output from all 47 species
Adi_g060741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.19G019200.1 Ceric.19G019200 not classified & original description: pacid=50576159... 0.04 OrthoFinder output from all 47 species
Ceric.28G000600.1 Ceric.28G000600 not classified & original description: pacid=50570870... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28850.1 LOC_Os09g28850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g07044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005362 No alias not classified & original description: CDS=1-1965 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0090.g018756 No alias not classified & original description: CDS=1-2328 0.02 OrthoFinder output from all 47 species
Tin_g08812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021904_P001 Zm00001e021904 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
InterPro domains Description Start Stop
IPR006869 DUF547 253 398
No external refs found!