Pir_g01994 (UBP23)

Aliases : UBP23

Description : deubiquitinase *(UBP23) & original description: none

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g01994

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00065p00205690	UBP23,...	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
Adi_g013897	UBP25	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g30011	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08916	UBP23	deubiquitinase *(UBP23) & original description: none	0.04	OrthoFinder output from all 47 species
Als_g19936	UBP25	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0056.g034212	UBP23	deubiquitinase *(UBP23) & original description: CDS=342-2441	0.03	OrthoFinder output from all 47 species
Cba_g01298	UBP25	deubiquitinase *(UBP25) & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g07711	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G086800.1	UBP23, Ceric.13G086800	deubiquitinase *(UBP23) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.28G067600.1	UBP23, Ceric.28G067600	deubiquitinase *(UBP23) & original description:...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000663.67	UBP15	Protein degradation.peptidase families.cysteine-type...	0.01	OrthoFinder output from all 47 species
Ehy_g31799	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os09g28940.1	UBP17, LOC_Os09g28940	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Mp2g05560.1	UBP18	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Mp3g16110.1	UBP23	deubiquitinase (UBP23)	0.03	OrthoFinder output from all 47 species
Ore_g29641	UBP25	deubiquitinase *(UBP25) & original description: none	0.07	OrthoFinder output from all 47 species
Pir_g24151	UBP19	deubiquitinase *(UBP15-21) & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g19055	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g05909	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g04367	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g076210.3.1	UBP16, Solyc04g076210	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Solyc07g005530.4.1	UBP23, Solyc07g005530	deubiquitinase (UBP23)	0.02	OrthoFinder output from all 47 species
Tin_g01115	UBP23	deubiquiTinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e024878_P003	UBP15, Zm00001e024878	deubiquitinase (UBP15-21)	0.02	OrthoFinder output from all 47 species
Zm00001e036315_P001	UBP23, Zm00001e036315	deubiquitinase (UBP23)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	IEP	HCCA
BP	GO:0002098	tRNA wobble uridine modification	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006400	tRNA modification	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
CC	GO:0033588	elongator holoenzyme complex	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	98	397

External Links

No external refs found!

Pir_g01994 (UBP23)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation