1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g01949

Pir_g01949


Description : not classified & original description: none


Gene families : OG0000885 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000885_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01949
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00108230 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G01070 No alias Lung seven transmembrane receptor family protein 0.04 OrthoFinder output from all 47 species
Adi_g059109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g087406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g52697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22011.t1 Aspi01Gene22011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53386.t1 Aspi01Gene53386 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0215.g058397 No alias not classified & original description: CDS=11-1567 0.03 OrthoFinder output from all 47 species
Azfi_s0487.g073471 No alias not classified & original description: CDS=317-1819 0.05 OrthoFinder output from all 47 species
Cba_g13634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G112600.1 Ceric.02G112600 not classified & original description: pacid=50585642... 0.02 OrthoFinder output from all 47 species
Dac_g03307 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g14534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08158 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g47905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07751 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01016725001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01023009001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_26909 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g26830.1 LOC_Os09g26830 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g09106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03073 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_5171877g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g07760.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g04510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10372 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007413 No alias not classified & original description: CDS=258-1787 0.03 OrthoFinder output from all 47 species
Sam_g51864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo267335 No alias No description available 0.04 OrthoFinder output from all 47 species
Smo77185 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g122250.3.1 Solyc03g122250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g045600.2.1 Solyc10g045600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g33554 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12327 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009637 GPR107/GPR108-like 180 466
No external refs found!