1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g01617

Pir_g01617


Description : not classified & original description: none


Gene families : OG0001389 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001389_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01617

Target Alias Description ECC score Gene Family Method Actions
Adi_g059417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05645 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15730.t2 Aspi01Gene15730 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009993 No alias not classified & original description: CDS=110-1276 0.03 OrthoFinder output from all 47 species
Dac_g03269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009174 No alias not classified & original description: CDS=25-1161 0.03 OrthoFinder output from all 47 species
Sam_g52320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000178 exosome (RNase complex) IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 136 213
No external refs found!