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  5. Pir_g01274

Pir_g01274


Description : not classified & original description: none


Gene families : OG0006143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01274

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00203340 evm_27.TU.AmTr_v1... GTPase ERA-like, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Ala_g22081 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g12785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g009893 No alias not classified & original description: CDS=1-903 0.05 OrthoFinder output from all 47 species
Ceric.25G026200.1 Ceric.25G026200 not classified & original description: pacid=50594372... 0.05 OrthoFinder output from all 47 species
Mp2g20310.1 No alias GTPase ERA-like, chloroplastic OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Nbi_g01964 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g28699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo75698 No alias GTPase ERA1, chloroplastic OS=Zea mays 0.02 OrthoFinder output from all 47 species
Spa_g10099 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g15511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 161 278
IPR004044 KH_dom_type_2 363 439
No external refs found!