Description : RNA helicase component *(SKI2) of SUPERKILLER regulation complex & original description: none
Gene families : OG0000709 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000709_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00029p00206820 | evm_27.TU.AmTr_v1... | RNA processing.RNA decay.exosome complex.associated... | 0.02 | OrthoFinder output from all 47 species | |
Ala_g07737 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.04 | OrthoFinder output from all 47 species | |
Aob_g12480 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.15G051600.1 | Ceric.15G051600 | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Cre11.g482483 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g01701 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01024809001 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01037437001 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.02 | OrthoFinder output from all 47 species | |
MA_167255g0020 | HEN2 | DExH-box ATP-dependent RNA helicase DExH10... | 0.02 | OrthoFinder output from all 47 species | |
Mp6g05580.1 | No alias | RNA helicase component MTR4/HEN2 of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g15177 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g03203 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g17493 | No alias | RNA helicase component *(SKI2) of SUPERKILLER regulation... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g57471 | HEN2 | RNA helicase component *(HEN2) of Nuclear Exosome... | 0.02 | OrthoFinder output from all 47 species | |
Smo403447 | No alias | RNA processing.RNA decay.exosome complex.associated... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e013693_P002 | Zm00001e013693 | RNA helicase component SKI2 of SUPERKILLER (SKI)... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004386 | helicase activity | IEP | HCCA |
CC | GO:0005681 | spliceosomal complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0030151 | molybdenum ion binding | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No external refs found! |