1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g01051

Pir_g01051 (CLPX)


Aliases : CLPX

Description : unfoldase component *(ClpX) of mitochondrion Clp-type protease complex & original description: none


Gene families : OG0001706 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001706_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01051

Target Alias Description ECC score Gene Family Method Actions
Cre10.g461550 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g07714 CLPX unfoldase component *(ClpX) of mitochondrion Clp-type... 0.02 OrthoFinder output from all 47 species
Len_g39516 CLPX unfoldase component *(ClpX) of mitochondrion Clp-type... 0.03 OrthoFinder output from all 47 species
Lfl_g24192 CLPX unfoldase component *(ClpX) of mitochondrion Clp-type... 0.03 OrthoFinder output from all 47 species
Pir_g18218 CLPX unfoldase component *(ClpX) of mitochondrion Clp-type... 0.03 OrthoFinder output from all 47 species
Pir_g54532 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16587 No alias unfoldase component *(ClpX) of mitochondrion Clp-type... 0.04 OrthoFinder output from all 47 species
Zm00001e014150_P002 CLPX, Zm00001e014150 chaperone component ClpX of mitochondrion Clp-type... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 322 526
IPR019489 Clp_ATPase_C 533 604
No external refs found!