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  5. Pir_g01035

Pir_g01035 (SRO2)


Aliases : SRO2

Description : organellar-signalling mediator *(RCD1) & original description: none


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01035
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Lfl_g07371 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Spa_g13133 AtRCD1, RCD1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
MF GO:0140612 DNA damage sensor activity IEP HCCA
MF GO:0140664 ATP-dependent DNA damage sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR022003 RST 503 564
IPR012317 Poly(ADP-ribose)pol_cat_dom 270 361
IPR004170 WWE-dom 114 169
No external refs found!