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  5. Pir_g01011

Pir_g01011 (CYP71)


Aliases : CYP71

Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0005569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g01011

Target Alias Description ECC score Gene Family Method Actions
AT3G44600 CYP71 cyclophilin71 0.03 OrthoFinder output from all 47 species
Adi_g001190 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.37G032400.1 CYP71, Ceric.37G032400 EC_5.2 cis-trans-isomerase & original description:... 0.02 OrthoFinder output from all 47 species
Cre10.g453900 CYP71 Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
Dcu_g04842 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g04923 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g44330.1 CYP71, LOC_Os08g44330 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Lfl_g04089 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426516g0010 CYP71 Peptidyl-prolyl cis-trans isomerase CYP71 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g38390 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13442 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007371 CYP71 not classified & original description: CDS=27-575 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007449 CYP71 EC_5.2 cis-trans-isomerase & original description: CDS=205-1917 0.03 OrthoFinder output from all 47 species
Sam_g52370 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Smo164664 CYP71 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Spa_g18828 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11249 CYP71 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 459 607
IPR001680 WD40_repeat 56 78
No external refs found!