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  5. Pir_g00413

Pir_g00413


Description : LON-type protease & original description: none


Gene families : OG0004218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004218_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g00413
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00268340 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT1G75460 No alias ATP-dependent protease La (LON) domain protein 0.04 OrthoFinder output from all 47 species
Adi_g021349 No alias LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04535 No alias LON-type protease & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g04094 No alias LON-type protease & original description: none 0.06 OrthoFinder output from all 47 species
Als_g08107 No alias LON-type protease & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g02802 No alias LON-type protease & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03438.t1 Aspi01Gene03438 LON-type protease & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.31G006800.1 Ceric.31G006800 LON-type protease & original description: pacid=50574210... 0.03 OrthoFinder output from all 47 species
Cre02.g141550 No alias Protein degradation.peptidase families.serine-type... 0.01 OrthoFinder output from all 47 species
Dac_g00613 No alias LON-type protease & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g19904 No alias LON-type protease & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g06356 No alias LON-type protease & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02277 No alias LON-type protease & original description: none 0.06 OrthoFinder output from all 47 species
LOC_Os07g32560.1 LOC_Os07g32560 protease (LON) 0.02 OrthoFinder output from all 47 species
Lfl_g28412 No alias LON-type protease & original description: none 0.06 OrthoFinder output from all 47 species
MA_10429725g0010 No alias protease (LON) 0.01 OrthoFinder output from all 47 species
Msp_g10721 No alias LON-type protease & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g02032 No alias LON-type protease & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g03916 No alias LON-type protease & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g01884 No alias LON-type protease & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g49538 No alias LON-type protease & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21387 No alias LON-type protease & original description: none 0.15 OrthoFinder output from all 47 species
Zm00001e010456_P001 Zm00001e010456 protease (LON) 0.06 OrthoFinder output from all 47 species
Zm00001e035076_P001 Zm00001e035076 protease (LON) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003111 Lon_prtase_N 93 281
No external refs found!