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  5. Len_g58112

Len_g58112


Description : subunit zeta of cargo adaptor F-subcomplex & original description: none


Gene families : OG0003673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g58112

Target Alias Description ECC score Gene Family Method Actions
Als_g02767 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Aob_g01485 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Cre08.g371450 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 OrthoFinder output from all 47 species
Dac_g06388 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14889 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Ehy_g21225 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01021391001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
LOC_Os02g21250.1 LOC_Os02g21250 subunit zeta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
LOC_Os05g38610.1 LOC_Os05g38610 subunit zeta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
MA_10433636g0010 No alias subunit zeta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
Mp1g05960.1 No alias subunit zeta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Msp_g00292 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Nbi_g19235 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.05 OrthoFinder output from all 47 species
Pp3c4_17280V3.1 Pp3c4_17280 SNARE-like superfamily protein 0.01 OrthoFinder output from all 47 species
Sam_g27485 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Zm00001e027247_P001 Zm00001e027247 subunit zeta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0072546 EMC complex IEP HCCA
BP GO:0097354 prenylation IEP HCCA
MF GO:0106073 dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 31 173
No external refs found!