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  5. Len_g57192

Len_g57192


Description : not classified & original description: none


Gene families : OG0001561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001561_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g57192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00184660 evm_27.TU.AmTr_v1... Protein EMSY-LIKE 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g10884 No alias histone H3K36 methylation reader *(EML) & original... 0.05 OrthoFinder output from all 47 species
Aob_g04338 No alias histone H3K36 methylation reader *(EML) & original... 0.03 OrthoFinder output from all 47 species
Pir_g27463 No alias histone H3K36 methylation reader *(EML) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16700 No alias histone H3K36 methylation reader *(EML) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!