Len_g56825 (J20)


Aliases : J20

Description : not classified & original description: none


Gene families : OG0000227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g56825

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00168770 evm_27.TU.AmTr_v1... Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G13830 J20 DNAJ-like 20 0.03 OrthoFinder output from all 47 species
AT4G36040 No alias Chaperone DnaJ-domain superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g050963 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115717 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00783 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g00695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07977 TPR16 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g52964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g55671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61813.t1 Aspi01Gene61813 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61814.t1 Aspi01Gene61814 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene61820.t1 Aspi01Gene61820 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61821.t1 Aspi01Gene61821 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61832.t1 Aspi01Gene61832 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0365.g066960 No alias not classified & original description: CDS=1-849 0.04 OrthoFinder output from all 47 species
Ceric.08G059800.1 Ceric.08G059800 not classified & original description: pacid=50638010... 0.04 OrthoFinder output from all 47 species
Ceric.08G060000.1 ERDJ3B,... not classified & original description: pacid=50638460... 0.05 OrthoFinder output from all 47 species
Ceric.20G067400.1 Ceric.20G067400 not classified & original description: pacid=50566038... 0.03 OrthoFinder output from all 47 species
Cre05.g232000 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g17949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01006408001 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01009924001 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024057001 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_02868 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_04899 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_04901 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_09159 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_09162 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_15815 No alias Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g28728 J20 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427494g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_276247g0010 No alias Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_281725g0010 J20 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_356104g0010 J20 Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_673025g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_9622241g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g33740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08236 ATDJC39, ARL2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g21859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g065970.1.1 Solyc07g065970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g35564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001518_P001 J2, ATJ2, Zm00001e001518 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e003997_P001 Zm00001e003997 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e024686_P001 Zm00001e024686 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025612_P001 J20, Zm00001e025612 Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 33 97
No external refs found!