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  5. Len_g56436

Len_g56436 (EMB2762)


Aliases : EMB2762

Description : SSU processome assembly factor *(NOC4) & original description: none


Gene families : OG0004927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004927_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g56436

Target Alias Description ECC score Gene Family Method Actions
Ceric.14G034900.1 EMB2762, Ceric.14G034900 SSU processome assembly factor *(NOC4) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03035 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01004114001 EMB2762 No description available 0.02 OrthoFinder output from all 47 species
MA_10433722g0010 EMB2762 SSU processome assembly factor (NOC4) 0.03 OrthoFinder output from all 47 species
MA_9224196g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 330 510
No external refs found!