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  5. Len_g55783

Len_g55783


Description : not classified & original description: none


Gene families : OG0002418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002418_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g55783
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene32188.t1 Aspi01Gene32188 symbiosis factor *(VAPYRIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58498.t1 Aspi01Gene58498 symbiosis factor *(VAPYRIN) & original description: none 0.04 OrthoFinder output from all 47 species
Cre14.g627100 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g29791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g61330.1 LOC_Os01g61330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Smo35439 AGD2 No description available 0.02 OrthoFinder output from all 47 species
Spa_g10388 No alias symbiosis factor *(VAPYRIN) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 265 318
IPR000535 MSP_dom 23 98
IPR002110 Ankyrin_rpt 356 448
IPR002110 Ankyrin_rpt 139 225
No external refs found!