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  5. Len_g55550

Len_g55550


Description : not classified & original description: none


Gene families : OG0005121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005121_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g55550

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000123.23 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g538500 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g09409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_29253 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g18840.1 LOC_Os03g18840 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10435957g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g36919 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR007148 SSU_processome_Utp12 491 593
No external refs found!