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  5. Len_g49393

Len_g49393


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g49393
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT5G01660 No alias CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch,... 0.03 OrthoFinder output from all 47 species
Adi_g022798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g122099 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06670 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57280 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g13927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44436.t1 Aspi01Gene44436 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0780.g086675 No alias not classified & original description: CDS=1-675 0.06 OrthoFinder output from all 47 species
Cba_g24024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z076400.1 Ceric.1Z076400 not classified & original description: pacid=50565862... 0.03 OrthoFinder output from all 47 species
Ceric.20G045600.1 Ceric.20G045600 not classified & original description: pacid=50566430... 0.03 OrthoFinder output from all 47 species
Dcu_g11066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46167 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g07220.1 LOC_Os05g07220 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 112.0) 0.02 OrthoFinder output from all 47 species
LOC_Os06g07770.1 LOC_Os06g07770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g12998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429587g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 92.8) 0.03 OrthoFinder output from all 47 species
MA_184449g0010 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 110.0) 0.02 OrthoFinder output from all 47 species
Msp_g13161 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g050610.3.1 Solyc06g050610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 102.0) 0.03 OrthoFinder output from all 47 species
Spa_g29449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g31736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 176 302
No external refs found!