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  5. Len_g49285

Len_g49285


Description : peptidyl-tRNA hydrolase *(VMS1) & original description: none


Gene families : OG0006866 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g49285

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0032.g024965 No alias peptidyl-tRNA hydrolase *(VMS1) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g12284 No alias peptidyl-tRNA hydrolase *(VMS1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13635 No alias peptidyl-tRNA hydrolase *(VMS1) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37837 No alias peptidyl-tRNA hydrolase *(VMS1) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g091510.4.1 Solyc01g091510 peptidyl-tRNA hydrolase (VMS1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041175 VLRF1/Vms1 229 371
No external refs found!