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  5. Len_g49157

Len_g49157


Description : not classified & original description: none


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g49157
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00033430 evm_27.TU.AmTr_v1... Cell number regulator 10 OS=Zea mays 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00034340 PCR2,... Cell number regulator 2 OS=Zea mays 0.02 OrthoFinder output from all 47 species
AMTR_s00067p00142050 evm_27.TU.AmTr_v1... Cell number regulator 2 OS=Zea mays 0.01 OrthoFinder output from all 47 species
AT1G14880 PCR1 PLANT CADMIUM RESISTANCE 1 0.03 OrthoFinder output from all 47 species
AT1G49030 No alias PLAC8 family protein 0.05 OrthoFinder output from all 47 species
AT1G52200 No alias PLAC8 family protein 0.02 OrthoFinder output from all 47 species
AT3G18460 No alias PLAC8 family protein 0.05 OrthoFinder output from all 47 species
AT5G35525 No alias PLAC8 family protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene13588.t1 Aspi01Gene13588 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cre16.g695700 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g44754 PCR11 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Dde_g42168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031753001 No alias Cell number regulator 1 OS=Zea mays 0.03 OrthoFinder output from all 47 species
GSVIVT01031754001 PCR2 Cell number regulator 1 OS=Zea mays 0.04 OrthoFinder output from all 47 species
Gb_37164 No alias Cell number regulator 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os02g18540.1 LOC_Os02g18540 Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61470.1 LOC_Os03g61470 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os03g61480.1 LOC_Os03g61480 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g61500.1 PCR2, LOC_Os03g61500 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
LOC_Os06g32910.1 LOC_Os06g32910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_23074g0010 No alias Cell number regulator 1 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
MA_40999g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7245g0010 PCR11 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_79837g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g10640.1 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Pnu_g23660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012574 No alias not classified & original description: CDS=485-961 0.03 OrthoFinder output from all 47 species
Smo439474 No alias Cell number regulator 4 OS=Zea mays 0.02 OrthoFinder output from all 47 species
Solyc01g005470.3.1 PCR2, Solyc01g005470 Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g009620.4.1 Solyc05g009620 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc12g037950.2.1 Solyc12g037950 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
Zm00001e023819_P001 Zm00001e023819 Cell number regulator 1 OS=Zea mays... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 9 107
No external refs found!