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  5. Len_g48766

Len_g48766


Description : not classified & original description: none


Gene families : OG0005834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005834_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g48766

Target Alias Description ECC score Gene Family Method Actions
AT3G26070 No alias Plastid-lipid associated protein PAP / fibrillin family protein 0.03 OrthoFinder output from all 47 species
Adi_g041304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g10400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15037 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g04164 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g22462 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g059935 No alias not classified & original description: CDS=43-876 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020603.30 No alias Probable plastid-lipid-associated protein 4,... 0.02 OrthoFinder output from all 47 species
Dcu_g42345 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g09110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01022995001 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
GSVIVT01022998001 No alias Probable plastid-lipid-associated protein 4,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g49720.1 LOC_Os03g49720 Probable plastid-lipid-associated protein 4,... 0.07 OrthoFinder output from all 47 species
MA_10435383g0010 No alias Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
Nbi_g02685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g35789 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g13948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52172 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc11g044530.2.1 Solyc11g044530 Probable plastid-lipid-associated protein 4,... 0.03 OrthoFinder output from all 47 species
Spa_g50814 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e005397_P001 Zm00001e005397 Probable plastid-lipid-associated protein 4,... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 64 224
No external refs found!